Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TNFSF4P23510 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.56□□□□□ -0.24
TNFSF4P23510 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.56□□□□□ -0.24
TNFSF4P23510 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.56□□□□□ -0.24
TNFSF4P23510 EEF1DP4-201ENST00000446006 880 ntBASIC13.56□□□□□ -0.24
TNFSF4P23510 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.56□□□□□ -0.24
TNFSF4P23510 SDHAP3-202ENST00000515467 728 ntBASIC13.56□□□□□ -0.24
TNFSF4P23510 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.56□□□□□ -0.24
TNFSF4P23510 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.56□□□□□ -0.24
TNFSF4P23510 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.56□□□□□ -0.24
TNFSF4P23510 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 AJ011932.1-201ENST00000621707 465 ntBASIC13.56□□□□□ -0.24
TNFSF4P23510 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.56□□□□□ -0.24
TNFSF4P23510 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TNFSF4P23510 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.56□□□□□ -0.24
TNFSF4P23510 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TNFSF4P23510 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
TNFSF4P23510 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.56□□□□□ -0.24
TNFSF4P23510 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 PCDHA1-201ENST00000378133 2726 ntBASIC13.55□□□□□ -0.24
TNFSF4P23510 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.55□□□□□ -0.24
TNFSF4P23510 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TNFSF4P23510 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TNFSF4P23510 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
TNFSF4P23510 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.55□□□□□ -0.24
TNFSF4P23510 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.55□□□□□ -0.24
TNFSF4P23510 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TNFSF4P23510 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
TNFSF4P23510 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.55□□□□□ -0.24
TNFSF4P23510 PHKG1P2-201ENST00000457537 863 ntBASIC13.55□□□□□ -0.24
TNFSF4P23510 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.55□□□□□ -0.24
TNFSF4P23510 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.55□□□□□ -0.24
TNFSF4P23510 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.55□□□□□ -0.24
TNFSF4P23510 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.55□□□□□ -0.24
TNFSF4P23510 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.55□□□□□ -0.24
TNFSF4P23510 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.55□□□□□ -0.24
TNFSF4P23510 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.55□□□□□ -0.24
TNFSF4P23510 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
TNFSF4P23510 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TNFSF4P23510 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.55□□□□□ -0.24
TNFSF4P23510 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 AC069224.1-201ENST00000566372 1715 ntBASIC13.55□□□□□ -0.24
TNFSF4P23510 LINC02447-202ENST00000501888 2146 ntBASIC13.55□□□□□ -0.24
TNFSF4P23510 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TNFSF4P23510 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TNFSF4P23510 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 AC022144.1-201ENST00000602255 1580 ntBASIC13.54□□□□□ -0.24
TNFSF4P23510 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TNFSF4P23510 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 CDC14C-201ENST00000428251 1719 ntBASIC13.54□□□□□ -0.24
TNFSF4P23510 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.54□□□□□ -0.24
TNFSF4P23510 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.54□□□□□ -0.24
TNFSF4P23510 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TNFSF4P23510 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.54□□□□□ -0.24
TNFSF4P23510 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.54□□□□□ -0.24
TNFSF4P23510 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.54□□□□□ -0.24
TNFSF4P23510 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.54□□□□□ -0.24
TNFSF4P23510 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.54□□□□□ -0.24
TNFSF4P23510 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.54□□□□□ -0.24
TNFSF4P23510 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms