Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC126365.1-201ENST00000578585 1514 ntBASIC16.57■□□□□ 0.24
MMP8P22894 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 AC100757.3-201ENST00000622361 1406 ntBASIC16.57■□□□□ 0.24
MMP8P22894 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 MIR943-201ENST00000401286 94 ntBASIC16.57■□□□□ 0.24
MMP8P22894 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.57■□□□□ 0.24
MMP8P22894 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 SDHAP3-202ENST00000515467 728 ntBASIC16.57■□□□□ 0.24
MMP8P22894 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP8P22894 DUX4L27-201ENST00000554796 1261 ntBASIC16.57■□□□□ 0.24
MMP8P22894 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
MMP8P22894 LINC01115-203ENST00000606068 577 ntBASIC16.57■□□□□ 0.24
MMP8P22894 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP8P22894 AL590560.3-201ENST00000623350 461 ntBASIC16.57■□□□□ 0.24
MMP8P22894 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP8P22894 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP8P22894 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MMP8P22894 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP8P22894 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP8P22894 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP8P22894 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP8P22894 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.56■□□□□ 0.24
MMP8P22894 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
MMP8P22894 AC084364.1-201ENST00000551967 1556 ntBASIC16.56■□□□□ 0.24
MMP8P22894 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
MMP8P22894 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP8P22894 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
MMP8P22894 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP8P22894 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MMP8P22894 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
MMP8P22894 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.56■□□□□ 0.24
MMP8P22894 AC015922.1-201ENST00000421102 1152 ntBASIC16.56■□□□□ 0.24
MMP8P22894 TSSK5P-201ENST00000423978 907 ntBASIC16.56■□□□□ 0.24
MMP8P22894 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP8P22894 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP8P22894 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.56■□□□□ 0.24
MMP8P22894 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
MMP8P22894 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP8P22894 AF228730.6-201ENST00000641497 218 ntBASIC16.56■□□□□ 0.24
MMP8P22894 AC084121.3-201ENST00000641716 218 ntBASIC16.56■□□□□ 0.24
MMP8P22894 AL109936.8-201ENST00000641772 604 ntBASIC16.56■□□□□ 0.24
MMP8P22894 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP8P22894 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP8P22894 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 DBET-201ENST00000630918 3363 ntBASIC16.55■□□□□ 0.24
MMP8P22894 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP8P22894 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.55■□□□□ 0.24
MMP8P22894 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP8P22894 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.55■□□□□ 0.24
MMP8P22894 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
MMP8P22894 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.55■□□□□ 0.24
MMP8P22894 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.55■□□□□ 0.24
MMP8P22894 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.55■□□□□ 0.24
MMP8P22894 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
MMP8P22894 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
MMP8P22894 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms