Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KCNA3P22001 LRRC59-203ENST00000576448 1531 ntBASIC19.02■□□□□ 0.64
KCNA3P22001 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
KCNA3P22001 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KCNA3P22001 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
KCNA3P22001 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KCNA3P22001 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.02■□□□□ 0.64
KCNA3P22001 FGFR3P1-201ENST00000449999 601 ntBASIC19.02■□□□□ 0.64
KCNA3P22001 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KCNA3P22001 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.02■□□□□ 0.64
KCNA3P22001 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.02■□□□□ 0.64
KCNA3P22001 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.02■□□□□ 0.64
KCNA3P22001 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.02■□□□□ 0.64
KCNA3P22001 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KCNA3P22001 AC103691.2-201ENST00000618824 433 ntBASIC19.02■□□□□ 0.64
KCNA3P22001 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.02■□□□□ 0.64
KCNA3P22001 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.02■□□□□ 0.64
KCNA3P22001 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.02■□□□□ 0.64
KCNA3P22001 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KCNA3P22001 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KCNA3P22001 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.02■□□□□ 0.64
KCNA3P22001 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KCNA3P22001 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
KCNA3P22001 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
KCNA3P22001 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
KCNA3P22001 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KCNA3P22001 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KCNA3P22001 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
KCNA3P22001 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
KCNA3P22001 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
KCNA3P22001 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KCNA3P22001 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
KCNA3P22001 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
KCNA3P22001 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.01■□□□□ 0.63
KCNA3P22001 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.01■□□□□ 0.63
KCNA3P22001 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.01■□□□□ 0.63
KCNA3P22001 PDIA3P2-201ENST00000428073 158 ntBASIC19.01■□□□□ 0.63
KCNA3P22001 AC021723.1-201ENST00000486306 515 ntBASIC19.01■□□□□ 0.63
KCNA3P22001 AC019193.1-201ENST00000506678 823 ntBASIC19.01■□□□□ 0.63
KCNA3P22001 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC19.01■□□□□ 0.63
KCNA3P22001 PGAM1P5-201ENST00000548011 764 ntBASIC19.01■□□□□ 0.63
KCNA3P22001 AC106820.3-201ENST00000561653 397 ntBASIC19.01■□□□□ 0.63
KCNA3P22001 AC135983.4-201ENST00000564116 1262 ntBASIC19.01■□□□□ 0.63
KCNA3P22001 MIR4783-201ENST00000580343 82 ntBASIC19.01■□□□□ 0.63
KCNA3P22001 MIR4313-201ENST00000580760 101 ntBASIC19.01■□□□□ 0.63
KCNA3P22001 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC19.01■□□□□ 0.63
KCNA3P22001 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
KCNA3P22001 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
KCNA3P22001 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
KCNA3P22001 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KCNA3P22001 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
KCNA3P22001 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
KCNA3P22001 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KCNA3P22001 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
KCNA3P22001 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
KCNA3P22001 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19■□□□□ 0.63
KCNA3P22001 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
KCNA3P22001 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19■□□□□ 0.63
KCNA3P22001 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KCNA3P22001 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
KCNA3P22001 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19■□□□□ 0.63
KCNA3P22001 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC19■□□□□ 0.63
KCNA3P22001 RN7SL181P-201ENST00000462921 277 ntBASIC19■□□□□ 0.63
KCNA3P22001 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19■□□□□ 0.63
KCNA3P22001 RN7SL818P-201ENST00000485099 259 ntBASIC19■□□□□ 0.63
KCNA3P22001 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19■□□□□ 0.63
KCNA3P22001 MARK2P5-201ENST00000507649 634 ntBASIC19■□□□□ 0.63
KCNA3P22001 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19■□□□□ 0.63
KCNA3P22001 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
KCNA3P22001 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19■□□□□ 0.63
KCNA3P22001 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19■□□□□ 0.63
KCNA3P22001 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 RN7SL725P-201ENST00000606439 259 ntBASIC19■□□□□ 0.63
KCNA3P22001 AC025181.2-201ENST00000606994 802 ntBASIC19■□□□□ 0.63
KCNA3P22001 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
KCNA3P22001 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KCNA3P22001 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms