Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.97■□□□□ 0.31
CD58P19256 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.97■□□□□ 0.31
CD58P19256 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD58P19256 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CD58P19256 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CD58P19256 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.96■□□□□ 0.31
CD58P19256 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.96■□□□□ 0.31
CD58P19256 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CD58P19256 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CD58P19256 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CD58P19256 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.96■□□□□ 0.31
CD58P19256 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.96■□□□□ 0.31
CD58P19256 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.96■□□□□ 0.31
CD58P19256 TARDBPP1-201ENST00000442013 1203 ntBASIC16.96■□□□□ 0.31
CD58P19256 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CD58P19256 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CD58P19256 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.96■□□□□ 0.31
CD58P19256 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.96■□□□□ 0.31
CD58P19256 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.96■□□□□ 0.31
CD58P19256 AC025048.3-201ENST00000590609 569 ntBASIC16.96■□□□□ 0.31
CD58P19256 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.96■□□□□ 0.31
CD58P19256 AL355385.1-201ENST00000606123 409 ntBASIC16.96■□□□□ 0.31
CD58P19256 AC005702.4-201ENST00000618393 416 ntBASIC16.96■□□□□ 0.31
CD58P19256 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CD58P19256 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.96■□□□□ 0.31
CD58P19256 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
CD58P19256 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CD58P19256 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD58P19256 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.96■□□□□ 0.3
CD58P19256 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.96■□□□□ 0.3
CD58P19256 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD58P19256 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD58P19256 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CD58P19256 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CD58P19256 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CD58P19256 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.96■□□□□ 0.3
CD58P19256 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CD58P19256 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.95■□□□□ 0.3
CD58P19256 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CD58P19256 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.95■□□□□ 0.3
CD58P19256 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.95■□□□□ 0.3
CD58P19256 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.95■□□□□ 0.3
CD58P19256 AC004890.2-204ENST00000481968 304 ntBASIC16.95■□□□□ 0.3
CD58P19256 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.95■□□□□ 0.3
CD58P19256 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.95■□□□□ 0.3
CD58P19256 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.95■□□□□ 0.3
CD58P19256 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 NORAD-201ENST00000565493 5339 ntBASIC16.95■□□□□ 0.3
CD58P19256 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CD58P19256 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.95■□□□□ 0.3
CD58P19256 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.95■□□□□ 0.3
CD58P19256 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.95■□□□□ 0.3
CD58P19256 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CD58P19256 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.95■□□□□ 0.3
CD58P19256 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.95■□□□□ 0.3
CD58P19256 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD58P19256 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.94■□□□□ 0.3
CD58P19256 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CD58P19256 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD58P19256 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD58P19256 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.94■□□□□ 0.3
CD58P19256 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD58P19256 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CD58P19256 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD58P19256 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms