Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.1■□□□□ 0.49
BMP3P12645 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.1■□□□□ 0.49
BMP3P12645 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.1■□□□□ 0.49
BMP3P12645 BOLA2P3-201ENST00000404566 256 ntBASIC18.1■□□□□ 0.49
BMP3P12645 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.1■□□□□ 0.49
BMP3P12645 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.1■□□□□ 0.49
BMP3P12645 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
BMP3P12645 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.1■□□□□ 0.49
BMP3P12645 SNX29P1-201ENST00000548357 1007 ntBASIC18.1■□□□□ 0.49
BMP3P12645 AP001063.1-201ENST00000568332 529 ntBASIC18.1■□□□□ 0.49
BMP3P12645 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.1■□□□□ 0.49
BMP3P12645 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.1■□□□□ 0.49
BMP3P12645 MIR6775-201ENST00000617557 69 ntBASIC18.1■□□□□ 0.49
BMP3P12645 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 AP003680.1-201ENST00000598970 3660 ntBASIC18.1■□□□□ 0.49
BMP3P12645 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
BMP3P12645 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BMP3P12645 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.1■□□□□ 0.49
BMP3P12645 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
BMP3P12645 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.1■□□□□ 0.49
BMP3P12645 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BMP3P12645 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.1■□□□□ 0.49
BMP3P12645 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.09■□□□□ 0.49
BMP3P12645 AC005229.1-201ENST00000392885 409 ntBASIC18.09■□□□□ 0.49
BMP3P12645 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.09■□□□□ 0.49
BMP3P12645 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.09■□□□□ 0.49
BMP3P12645 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.09■□□□□ 0.49
BMP3P12645 BCRP2-202ENST00000447763 634 ntBASIC18.09■□□□□ 0.49
BMP3P12645 AC093433.1-201ENST00000458048 571 ntBASIC18.09■□□□□ 0.49
BMP3P12645 AC119751.2-201ENST00000504529 210 ntBASIC18.09■□□□□ 0.49
BMP3P12645 BCRP6-201ENST00000510112 632 ntBASIC18.09■□□□□ 0.49
BMP3P12645 BCRP7-201ENST00000511549 544 ntBASIC18.09■□□□□ 0.49
BMP3P12645 AP001889.1-201ENST00000525414 633 ntBASIC18.09■□□□□ 0.49
BMP3P12645 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.09■□□□□ 0.49
BMP3P12645 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.09■□□□□ 0.49
BMP3P12645 MIR4259-201ENST00000584466 101 ntBASIC18.09■□□□□ 0.49
BMP3P12645 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.09■□□□□ 0.49
BMP3P12645 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.09■□□□□ 0.49
BMP3P12645 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.09■□□□□ 0.49
BMP3P12645 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.09■□□□□ 0.49
BMP3P12645 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BMP3P12645 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BMP3P12645 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
BMP3P12645 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.08■□□□□ 0.49
BMP3P12645 LINC02199-201ENST00000506655 2702 ntBASIC18.08■□□□□ 0.49
BMP3P12645 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.08■□□□□ 0.49
BMP3P12645 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BMP3P12645 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BMP3P12645 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
BMP3P12645 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BMP3P12645 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.08■□□□□ 0.49
BMP3P12645 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.08■□□□□ 0.49
BMP3P12645 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BMP3P12645 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BMP3P12645 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.08■□□□□ 0.48
BMP3P12645 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BMP3P12645 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
BMP3P12645 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BMP3P12645 BAATP1-201ENST00000412284 1225 ntBASIC18.08■□□□□ 0.48
BMP3P12645 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.08■□□□□ 0.48
BMP3P12645 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.08■□□□□ 0.48
BMP3P12645 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.08■□□□□ 0.48
BMP3P12645 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.08■□□□□ 0.48
BMP3P12645 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BMP3P12645 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.08■□□□□ 0.48
BMP3P12645 GAPDHP40-201ENST00000505218 1006 ntBASIC18.08■□□□□ 0.48
BMP3P12645 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.08■□□□□ 0.48
BMP3P12645 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.08■□□□□ 0.48
BMP3P12645 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.08■□□□□ 0.48
BMP3P12645 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.08■□□□□ 0.48
BMP3P12645 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.08■□□□□ 0.48
BMP3P12645 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.08■□□□□ 0.48
BMP3P12645 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms