Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.37□□□□□ -0.43
CD28P10747 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.36□□□□□ -0.43
CD28P10747 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 EEF1DP4-201ENST00000446006 880 ntBASIC12.36□□□□□ -0.43
CD28P10747 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.36□□□□□ -0.43
CD28P10747 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.36□□□□□ -0.43
CD28P10747 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.36□□□□□ -0.43
CD28P10747 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.36□□□□□ -0.43
CD28P10747 AC106886.1-201ENST00000568660 600 ntBASIC12.36□□□□□ -0.43
CD28P10747 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.36□□□□□ -0.43
CD28P10747 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.36□□□□□ -0.43
CD28P10747 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.36□□□□□ -0.43
CD28P10747 AL158212.4-201ENST00000624062 1286 ntBASIC12.36□□□□□ -0.43
CD28P10747 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CD28P10747 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CD28P10747 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.36□□□□□ -0.43
CD28P10747 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.36□□□□□ -0.43
CD28P10747 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CD28P10747 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 AC074338.1-201ENST00000416825 156 ntBASIC12.35□□□□□ -0.43
CD28P10747 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 RPL13P2-201ENST00000440687 659 ntBASIC12.35□□□□□ -0.43
CD28P10747 AC234783.1-201ENST00000441761 496 ntBASIC12.35□□□□□ -0.43
CD28P10747 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.35□□□□□ -0.43
CD28P10747 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD28P10747 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.35□□□□□ -0.43
CD28P10747 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.35□□□□□ -0.43
CD28P10747 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms