Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC175P0C221 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC175P0C221 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC175P0C221 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC175P0C221 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCDC175P0C221 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC175P0C221 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC175P0C221 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC175P0C221 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC175P0C221 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC175P0C221 AP002414.3-201ENST00000589352 1468 ntBASIC17.12■□□□□ 0.33
CCDC175P0C221 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC175P0C221 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC175P0C221 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 PRSS29P-201ENST00000440800 595 ntBASIC17.11■□□□□ 0.33
CCDC175P0C221 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC175P0C221 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC175P0C221 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC175P0C221 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC175P0C221 AL445228.2-201ENST00000605589 952 ntBASIC17.11■□□□□ 0.33
CCDC175P0C221 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC175P0C221 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC175P0C221 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC175P0C221 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC175P0C221 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC175P0C221 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC175P0C221 BNIP3P1-202ENST00000550043 1585 ntBASIC17.11■□□□□ 0.33
CCDC175P0C221 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC175P0C221 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC175P0C221 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC175P0C221 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC175P0C221 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC175P0C221 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC175P0C221 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC175P0C221 AC092474.2-201ENST00000424288 719 ntBASIC17.1■□□□□ 0.33
CCDC175P0C221 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC175P0C221 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 PRYP6-201ENST00000514804 343 ntBASIC17.1■□□□□ 0.33
CCDC175P0C221 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC175P0C221 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC175P0C221 LINC01711-201ENST00000598340 967 ntBASIC17.1■□□□□ 0.33
CCDC175P0C221 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC175P0C221 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 AL691432.1-201ENST00000596308 1422 ntBASIC17.1■□□□□ 0.33
CCDC175P0C221 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC175P0C221 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC175P0C221 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC175P0C221 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC175P0C221 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC175P0C221 C8orf49-201ENST00000525043 1968 ntBASIC17.09■□□□□ 0.33
CCDC175P0C221 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC175P0C221 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC175P0C221 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC175P0C221 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC175P0C221 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC175P0C221 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC175P0C221 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC175P0C221 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC175P0C221 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC175P0C221 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC175P0C221 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC175P0C221 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC175P0C221 MIR4751-201ENST00000578027 74 ntBASIC17.09■□□□□ 0.33
CCDC175P0C221 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms