Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CYP3A4P08684 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.62■□□□□ 0.41
CYP3A4P08684 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.61■□□□□ 0.41
CYP3A4P08684 AC008741.2-201ENST00000612792 3115 ntBASIC17.61■□□□□ 0.41
CYP3A4P08684 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.61■□□□□ 0.41
CYP3A4P08684 AL512384.1-201ENST00000406683 331 ntBASIC17.61■□□□□ 0.41
CYP3A4P08684 SOCS2P1-201ENST00000417727 557 ntBASIC17.61■□□□□ 0.41
CYP3A4P08684 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.61■□□□□ 0.41
CYP3A4P08684 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 AL162726.2-201ENST00000438986 1017 ntBASIC17.61■□□□□ 0.41
CYP3A4P08684 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.61■□□□□ 0.41
CYP3A4P08684 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.61■□□□□ 0.41
CYP3A4P08684 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.61■□□□□ 0.41
CYP3A4P08684 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.61■□□□□ 0.41
CYP3A4P08684 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.61■□□□□ 0.41
CYP3A4P08684 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CYP3A4P08684 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.61■□□□□ 0.41
CYP3A4P08684 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.61■□□□□ 0.41
CYP3A4P08684 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.61■□□□□ 0.41
CYP3A4P08684 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.61■□□□□ 0.41
CYP3A4P08684 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CYP3A4P08684 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CYP3A4P08684 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CYP3A4P08684 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CYP3A4P08684 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CYP3A4P08684 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.6■□□□□ 0.41
CYP3A4P08684 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CYP3A4P08684 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.6■□□□□ 0.41
CYP3A4P08684 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.6■□□□□ 0.41
CYP3A4P08684 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.6■□□□□ 0.41
CYP3A4P08684 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.6■□□□□ 0.41
CYP3A4P08684 AC132938.2-201ENST00000579188 680 ntBASIC17.6■□□□□ 0.41
CYP3A4P08684 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.6■□□□□ 0.41
CYP3A4P08684 AL591163.1-201ENST00000641757 987 ntBASIC17.6■□□□□ 0.41
CYP3A4P08684 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CYP3A4P08684 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CYP3A4P08684 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.6■□□□□ 0.41
CYP3A4P08684 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CYP3A4P08684 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CYP3A4P08684 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CYP3A4P08684 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.59■□□□□ 0.41
CYP3A4P08684 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CYP3A4P08684 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.59■□□□□ 0.41
CYP3A4P08684 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CYP3A4P08684 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CYP3A4P08684 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.59■□□□□ 0.41
CYP3A4P08684 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.59■□□□□ 0.41
CYP3A4P08684 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.59■□□□□ 0.41
CYP3A4P08684 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.59■□□□□ 0.41
CYP3A4P08684 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.59■□□□□ 0.41
CYP3A4P08684 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CYP3A4P08684 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.59■□□□□ 0.41
CYP3A4P08684 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.59■□□□□ 0.41
CYP3A4P08684 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.59■□□□□ 0.41
CYP3A4P08684 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms