Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCRP04035 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HMGCRP04035 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCRP04035 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCRP04035 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCRP04035 CD8B2-202ENST00000417670 633 ntBASIC17.68■□□□□ 0.42
HMGCRP04035 HINT2P1-201ENST00000419438 481 ntBASIC17.68■□□□□ 0.42
HMGCRP04035 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCRP04035 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 MPRIPP1-201ENST00000452433 1089 ntBASIC17.68■□□□□ 0.42
HMGCRP04035 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCRP04035 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCRP04035 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCRP04035 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCRP04035 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.68■□□□□ 0.42
HMGCRP04035 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCRP04035 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.68■□□□□ 0.42
HMGCRP04035 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCRP04035 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCRP04035 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HMGCRP04035 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.68■□□□□ 0.42
HMGCRP04035 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HMGCRP04035 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCRP04035 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
HMGCRP04035 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
HMGCRP04035 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
HMGCRP04035 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.67■□□□□ 0.42
HMGCRP04035 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.67■□□□□ 0.42
HMGCRP04035 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCRP04035 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
HMGCRP04035 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.67■□□□□ 0.42
HMGCRP04035 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HMGCRP04035 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HMGCRP04035 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCRP04035 MIR3619-201ENST00000579667 83 ntBASIC17.67■□□□□ 0.42
HMGCRP04035 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 AC138627.1-207ENST00000641560 1006 ntBASIC17.67■□□□□ 0.42
HMGCRP04035 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HMGCRP04035 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCRP04035 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HMGCRP04035 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCRP04035 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.67■□□□□ 0.42
HMGCRP04035 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.67■□□□□ 0.42
HMGCRP04035 PCDHA14-201ENST00000506751 2298 ntBASIC17.67■□□□□ 0.42
HMGCRP04035 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HMGCRP04035 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HMGCRP04035 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HMGCRP04035 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCRP04035 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HMGCRP04035 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCRP04035 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGCRP04035 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCRP04035 AC097359.3-201ENST00000603982 1210 ntBASIC17.66■□□□□ 0.42
HMGCRP04035 KRT8P19-201ENST00000551916 1455 ntBASIC17.66■□□□□ 0.42
HMGCRP04035 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCRP04035 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGCRP04035 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGCRP04035 AC134407.2-201ENST00000625089 1978 ntBASIC17.66■□□□□ 0.42
HMGCRP04035 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HMGCRP04035 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGCRP04035 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
HMGCRP04035 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCRP04035 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCRP04035 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms