Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.06□□□□□ -0.16
APOC1P02654 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.06□□□□□ -0.16
APOC1P02654 SPDYE9P-201ENST00000570642 692 ntBASIC14.06□□□□□ -0.16
APOC1P02654 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.06□□□□□ -0.16
APOC1P02654 SPDYE10P-202ENST00000612005 668 ntBASIC14.06□□□□□ -0.16
APOC1P02654 SPDYE8P-202ENST00000612377 668 ntBASIC14.06□□□□□ -0.16
APOC1P02654 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.05□□□□□ -0.16
APOC1P02654 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 FAM220BP-201ENST00000377689 816 ntBASIC14.05□□□□□ -0.16
APOC1P02654 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.05□□□□□ -0.16
APOC1P02654 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.05□□□□□ -0.16
APOC1P02654 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.05□□□□□ -0.16
APOC1P02654 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.05□□□□□ -0.16
APOC1P02654 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 IGHV3-62-201ENST00000520057 340 ntBASIC14.05□□□□□ -0.16
APOC1P02654 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 KRT18P58-201ENST00000527480 1120 ntBASIC14.05□□□□□ -0.16
APOC1P02654 SLC25A1P1-201ENST00000528351 927 ntBASIC14.05□□□□□ -0.16
APOC1P02654 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.05□□□□□ -0.16
APOC1P02654 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.05□□□□□ -0.16
APOC1P02654 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.05□□□□□ -0.16
APOC1P02654 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.05□□□□□ -0.16
APOC1P02654 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
APOC1P02654 AC026979.3-201ENST00000607315 403 ntBASIC14.05□□□□□ -0.16
APOC1P02654 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.05□□□□□ -0.16
APOC1P02654 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.05□□□□□ -0.16
APOC1P02654 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.05□□□□□ -0.16
APOC1P02654 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
APOC1P02654 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
APOC1P02654 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC1P02654 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 HLA-H-201ENST00000383620 1096 ntBASIC14.04□□□□□ -0.16
APOC1P02654 AC004987.2-201ENST00000395959 1148 ntBASIC14.04□□□□□ -0.16
APOC1P02654 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms