Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRAP01903 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRAP01903 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 AC015922.1-201ENST00000421102 1152 ntBASIC16.95■□□□□ 0.3
HLA-DRAP01903 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 UGT1A2P-201ENST00000454886 866 ntBASIC16.95■□□□□ 0.3
HLA-DRAP01903 INGX-202ENST00000489074 768 ntBASIC16.95■□□□□ 0.3
HLA-DRAP01903 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRAP01903 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRAP01903 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRAP01903 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRAP01903 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRAP01903 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DRAP01903 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRAP01903 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DRAP01903 AL162727.3-201ENST00000635661 2787 ntBASIC16.94■□□□□ 0.3
HLA-DRAP01903 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AL589987.1-201ENST00000453380 819 ntBASIC16.94■□□□□ 0.3
HLA-DRAP01903 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AL355385.1-201ENST00000606123 409 ntBASIC16.94■□□□□ 0.3
HLA-DRAP01903 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AC087481.3-201ENST00000602886 1894 ntBASIC16.94■□□□□ 0.3
HLA-DRAP01903 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HLA-DRAP01903 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HLA-DRAP01903 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DRAP01903 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.93■□□□□ 0.3
HLA-DRAP01903 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DRAP01903 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms