Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CBX6O95503 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.84■□□□□ 0.13
CBX6O95503 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.84■□□□□ 0.13
CBX6O95503 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.84■□□□□ 0.13
CBX6O95503 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.84■□□□□ 0.13
CBX6O95503 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 IGHV3-65-201ENST00000523210 341 ntBASIC15.84■□□□□ 0.13
CBX6O95503 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.84■□□□□ 0.13
CBX6O95503 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.84■□□□□ 0.13
CBX6O95503 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.84■□□□□ 0.13
CBX6O95503 AC011467.4-201ENST00000594891 528 ntBASIC15.84■□□□□ 0.13
CBX6O95503 CYP2A7P1-201ENST00000595391 815 ntBASIC15.84■□□□□ 0.13
CBX6O95503 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.84■□□□□ 0.13
CBX6O95503 AL353135.1-201ENST00000606729 504 ntBASIC15.84■□□□□ 0.13
CBX6O95503 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CBX6O95503 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
CBX6O95503 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.84■□□□□ 0.13
CBX6O95503 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.84■□□□□ 0.13
CBX6O95503 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.84■□□□□ 0.13
CBX6O95503 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.84■□□□□ 0.13
CBX6O95503 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CBX6O95503 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.84■□□□□ 0.13
CBX6O95503 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CBX6O95503 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CBX6O95503 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.84■□□□□ 0.13
CBX6O95503 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.84■□□□□ 0.13
CBX6O95503 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CBX6O95503 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CBX6O95503 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CBX6O95503 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CBX6O95503 SLC22A20-204ENST00000530038 1673 ntBASIC15.83■□□□□ 0.13
CBX6O95503 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CBX6O95503 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CBX6O95503 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.83■□□□□ 0.13
CBX6O95503 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CBX6O95503 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CBX6O95503 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.83■□□□□ 0.12
CBX6O95503 ELK2BP-201ENST00000415014 1224 ntBASIC15.83■□□□□ 0.12
CBX6O95503 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.83■□□□□ 0.12
CBX6O95503 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.83■□□□□ 0.12
CBX6O95503 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.83■□□□□ 0.12
CBX6O95503 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.83■□□□□ 0.12
CBX6O95503 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX6O95503 AC008667.4-201ENST00000607370 168 ntBASIC15.83■□□□□ 0.12
CBX6O95503 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
CBX6O95503 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX6O95503 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.83■□□□□ 0.12
CBX6O95503 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CBX6O95503 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.83■□□□□ 0.12
CBX6O95503 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CBX6O95503 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CBX6O95503 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX6O95503 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX6O95503 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX6O95503 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX6O95503 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.82■□□□□ 0.12
CBX6O95503 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CBX6O95503 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CBX6O95503 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX6O95503 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CBX6O95503 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX6O95503 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.82■□□□□ 0.12
CBX6O95503 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX6O95503 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CBX6O95503 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CBX6O95503 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.82■□□□□ 0.12
CBX6O95503 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX6O95503 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.82■□□□□ 0.12
CBX6O95503 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.82■□□□□ 0.12
CBX6O95503 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CBX6O95503 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.82■□□□□ 0.12
CBX6O95503 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.82■□□□□ 0.12
CBX6O95503 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.82■□□□□ 0.12
CBX6O95503 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.82■□□□□ 0.12
CBX6O95503 AC020765.3-201ENST00000613051 740 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms