Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFPL1O75677 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFPL1O75677 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFPL1O75677 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.88■□□□□ 0.13
RFPL1O75677 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RFPL1O75677 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RFPL1O75677 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.88■□□□□ 0.13
RFPL1O75677 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.88■□□□□ 0.13
RFPL1O75677 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFPL1O75677 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RFPL1O75677 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.87■□□□□ 0.13
RFPL1O75677 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.87■□□□□ 0.13
RFPL1O75677 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.87■□□□□ 0.13
RFPL1O75677 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RFPL1O75677 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.87■□□□□ 0.13
RFPL1O75677 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.87■□□□□ 0.13
RFPL1O75677 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.87■□□□□ 0.13
RFPL1O75677 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.87■□□□□ 0.13
RFPL1O75677 FAM86C2P-203ENST00000528684 1004 ntBASIC15.87■□□□□ 0.13
RFPL1O75677 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.87■□□□□ 0.13
RFPL1O75677 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RFPL1O75677 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.87■□□□□ 0.13
RFPL1O75677 SPTSSB-204ENST00000617024 1292 ntBASIC15.87■□□□□ 0.13
RFPL1O75677 AC009093.7-201ENST00000623853 1223 ntBASIC15.87■□□□□ 0.13
RFPL1O75677 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.87■□□□□ 0.13
RFPL1O75677 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.87■□□□□ 0.13
RFPL1O75677 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.87■□□□□ 0.13
RFPL1O75677 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RFPL1O75677 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.87■□□□□ 0.13
RFPL1O75677 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.87■□□□□ 0.13
RFPL1O75677 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFPL1O75677 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.87■□□□□ 0.13
RFPL1O75677 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.87■□□□□ 0.13
RFPL1O75677 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL1O75677 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RFPL1O75677 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL1O75677 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL1O75677 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
RFPL1O75677 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
RFPL1O75677 LINC00528-201ENST00000600723 2160 ntBASIC15.86■□□□□ 0.13
RFPL1O75677 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL1O75677 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL1O75677 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL1O75677 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL1O75677 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFPL1O75677 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.86■□□□□ 0.13
RFPL1O75677 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 AL627223.1-201ENST00000416693 442 ntBASIC15.86■□□□□ 0.13
RFPL1O75677 ADH5P3-201ENST00000433842 1137 ntBASIC15.86■□□□□ 0.13
RFPL1O75677 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.86■□□□□ 0.13
RFPL1O75677 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.86■□□□□ 0.13
RFPL1O75677 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.86■□□□□ 0.13
RFPL1O75677 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.86■□□□□ 0.13
RFPL1O75677 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.86■□□□□ 0.13
RFPL1O75677 AC024267.1-201ENST00000582320 895 ntBASIC15.86■□□□□ 0.13
RFPL1O75677 AC005498.2-205ENST00000593218 784 ntBASIC15.86■□□□□ 0.13
RFPL1O75677 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.86■□□□□ 0.13
RFPL1O75677 AC026120.1-201ENST00000611536 926 ntBASIC15.86■□□□□ 0.13
RFPL1O75677 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.86■□□□□ 0.13
RFPL1O75677 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.86■□□□□ 0.13
RFPL1O75677 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.86■□□□□ 0.13
RFPL1O75677 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.86■□□□□ 0.13
RFPL1O75677 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms