Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NDUFS3O75489 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.78■□□□□ 0.12
NDUFS3O75489 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.78■□□□□ 0.12
NDUFS3O75489 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 SSR4P1-203ENST00000599569 2260 ntBASIC15.78■□□□□ 0.12
NDUFS3O75489 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFS3O75489 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NDUFS3O75489 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 AC092384.3-202ENST00000564646 2873 ntBASIC15.77■□□□□ 0.12
NDUFS3O75489 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
NDUFS3O75489 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NDUFS3O75489 AC105250.1-201ENST00000509378 2057 ntBASIC15.77■□□□□ 0.12
NDUFS3O75489 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.77■□□□□ 0.12
NDUFS3O75489 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
NDUFS3O75489 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.77■□□□□ 0.12
NDUFS3O75489 AC136621.1-201ENST00000624017 2304 ntBASIC15.77■□□□□ 0.12
NDUFS3O75489 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 AC073347.1-201ENST00000421633 2643 ntBASIC15.77■□□□□ 0.12
NDUFS3O75489 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
NDUFS3O75489 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NDUFS3O75489 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NDUFS3O75489 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.77■□□□□ 0.12
NDUFS3O75489 AC109322.1-201ENST00000524499 1264 ntBASIC15.77■□□□□ 0.12
NDUFS3O75489 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.77■□□□□ 0.12
NDUFS3O75489 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.77■□□□□ 0.12
NDUFS3O75489 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.77■□□□□ 0.12
NDUFS3O75489 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFS3O75489 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NDUFS3O75489 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.77■□□□□ 0.11
NDUFS3O75489 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.77■□□□□ 0.11
NDUFS3O75489 CETN4P-206ENST00000642099 2168 ntBASIC15.77■□□□□ 0.11
NDUFS3O75489 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
NDUFS3O75489 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NDUFS3O75489 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.77■□□□□ 0.11
NDUFS3O75489 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDUFS3O75489 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDUFS3O75489 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
NDUFS3O75489 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NDUFS3O75489 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NDUFS3O75489 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.77■□□□□ 0.11
NDUFS3O75489 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NDUFS3O75489 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDUFS3O75489 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NDUFS3O75489 AC022532.1-201ENST00000624563 1728 ntBASIC15.77■□□□□ 0.11
NDUFS3O75489 TMBIM7P-203ENST00000641617 1718 ntBASIC15.77■□□□□ 0.11
NDUFS3O75489 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.77■□□□□ 0.11
NDUFS3O75489 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.76■□□□□ 0.11
NDUFS3O75489 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NDUFS3O75489 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.76■□□□□ 0.11
NDUFS3O75489 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 KRT8P12-202ENST00000472924 1397 ntBASIC15.76■□□□□ 0.11
NDUFS3O75489 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.76■□□□□ 0.11
NDUFS3O75489 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NDUFS3O75489 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
NDUFS3O75489 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.76■□□□□ 0.11
NDUFS3O75489 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.76■□□□□ 0.11
NDUFS3O75489 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
NDUFS3O75489 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NDUFS3O75489 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.76■□□□□ 0.11
NDUFS3O75489 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.76■□□□□ 0.11
NDUFS3O75489 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.76■□□□□ 0.11
NDUFS3O75489 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.76■□□□□ 0.11
NDUFS3O75489 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.76■□□□□ 0.11
NDUFS3O75489 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.76■□□□□ 0.11
NDUFS3O75489 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.76■□□□□ 0.11
NDUFS3O75489 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
NDUFS3O75489 HNRNPUP1-201ENST00000554987 333 ntBASIC15.76■□□□□ 0.11
NDUFS3O75489 AL079307.3-201ENST00000556114 283 ntBASIC15.76■□□□□ 0.11
NDUFS3O75489 AC025678.2-201ENST00000562061 970 ntBASIC15.76■□□□□ 0.11
NDUFS3O75489 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFS3O75489 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms