Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM3O75382 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM3O75382 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM3O75382 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM3O75382 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.81□□□□□ -0.04
TRIM3O75382 RN7SL828P-201ENST00000607615 303 ntBASIC14.81□□□□□ -0.04
TRIM3O75382 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM3O75382 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM3O75382 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 AL592424.1-201ENST00000563624 1536 ntBASIC14.81□□□□□ -0.04
TRIM3O75382 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.81□□□□□ -0.04
TRIM3O75382 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM3O75382 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
TRIM3O75382 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRIM3O75382 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM3O75382 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM3O75382 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM3O75382 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM3O75382 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM3O75382 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 AC093214.1-201ENST00000511688 1107 ntBASIC14.8□□□□□ -0.04
TRIM3O75382 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.8□□□□□ -0.04
TRIM3O75382 SPCS2P1-201ENST00000561636 679 ntBASIC14.8□□□□□ -0.04
TRIM3O75382 MIR4321-201ENST00000592276 80 ntBASIC14.8□□□□□ -0.04
TRIM3O75382 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 AC011467.4-201ENST00000594891 528 ntBASIC14.8□□□□□ -0.04
TRIM3O75382 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 AL133215.2-201ENST00000609242 977 ntBASIC14.8□□□□□ -0.04
TRIM3O75382 AC073592.8-201ENST00000624126 511 ntBASIC14.8□□□□□ -0.04
TRIM3O75382 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.8□□□□□ -0.04
TRIM3O75382 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM3O75382 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM3O75382 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM3O75382 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM3O75382 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRIM3O75382 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.8□□□□□ -0.04
TRIM3O75382 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.8□□□□□ -0.04
TRIM3O75382 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
TRIM3O75382 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRIM3O75382 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRIM3O75382 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.79□□□□□ -0.04
TRIM3O75382 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRIM3O75382 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms