Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PFDN1O60925 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PFDN1O60925 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
PFDN1O60925 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PFDN1O60925 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 FAM8A3P-201ENST00000427218 844 ntBASIC14.08□□□□□ -0.16
PFDN1O60925 AC004980.1-204ENST00000429707 299 ntBASIC14.08□□□□□ -0.16
PFDN1O60925 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.08□□□□□ -0.16
PFDN1O60925 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.08□□□□□ -0.16
PFDN1O60925 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.08□□□□□ -0.16
PFDN1O60925 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 AC015818.8-201ENST00000587907 1519 ntBASIC14.08□□□□□ -0.16
PFDN1O60925 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PFDN1O60925 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PFDN1O60925 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.08□□□□□ -0.16
PFDN1O60925 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
PFDN1O60925 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC14.08□□□□□ -0.16
PFDN1O60925 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.08□□□□□ -0.16
PFDN1O60925 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PFDN1O60925 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PFDN1O60925 AC113367.3-201ENST00000508316 1912 ntBASIC14.07□□□□□ -0.16
PFDN1O60925 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PFDN1O60925 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PFDN1O60925 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.07□□□□□ -0.16
PFDN1O60925 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.07□□□□□ -0.16
PFDN1O60925 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 KRT18P65-201ENST00000439811 1286 ntBASIC14.07□□□□□ -0.16
PFDN1O60925 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.07□□□□□ -0.16
PFDN1O60925 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.07□□□□□ -0.16
PFDN1O60925 MIR3180-4-201ENST00000582223 153 ntBASIC14.07□□□□□ -0.16
PFDN1O60925 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.07□□□□□ -0.16
PFDN1O60925 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.07□□□□□ -0.16
PFDN1O60925 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.07□□□□□ -0.16
PFDN1O60925 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PFDN1O60925 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC14.07□□□□□ -0.16
PFDN1O60925 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PFDN1O60925 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PFDN1O60925 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.06□□□□□ -0.16
PFDN1O60925 VENTXP1-201ENST00000569334 2716 ntBASIC14.06□□□□□ -0.16
PFDN1O60925 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PFDN1O60925 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PFDN1O60925 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms