Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CACNA1FO60840 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.5■□□□□ 0.71
CACNA1FO60840 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNA1FO60840 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CACNA1FO60840 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.5■□□□□ 0.71
CACNA1FO60840 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.5■□□□□ 0.71
CACNA1FO60840 DUX4L45-201ENST00000566406 1057 ntBASIC19.5■□□□□ 0.71
CACNA1FO60840 AL162274.1-201ENST00000617191 1098 ntBASIC19.5■□□□□ 0.71
CACNA1FO60840 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC19.5■□□□□ 0.71
CACNA1FO60840 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNA1FO60840 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.5■□□□□ 0.71
CACNA1FO60840 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.5■□□□□ 0.71
CACNA1FO60840 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CACNA1FO60840 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CACNA1FO60840 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CACNA1FO60840 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNA1FO60840 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CACNA1FO60840 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 AC016694.1-201ENST00000434179 700 ntBASIC19.49■□□□□ 0.71
CACNA1FO60840 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.49■□□□□ 0.71
CACNA1FO60840 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.49■□□□□ 0.71
CACNA1FO60840 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1FO60840 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.49■□□□□ 0.71
CACNA1FO60840 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1FO60840 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 LRRC59-203ENST00000576448 1531 ntBASIC19.48■□□□□ 0.71
CACNA1FO60840 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1FO60840 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.48■□□□□ 0.71
CACNA1FO60840 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 SLC25A47P1-201ENST00000531577 414 ntBASIC19.48■□□□□ 0.71
CACNA1FO60840 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.48■□□□□ 0.71
CACNA1FO60840 RAB43P1-201ENST00000561790 589 ntBASIC19.48■□□□□ 0.71
CACNA1FO60840 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.48■□□□□ 0.71
CACNA1FO60840 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1FO60840 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
CACNA1FO60840 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CACNA1FO60840 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CACNA1FO60840 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1FO60840 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1FO60840 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.48■□□□□ 0.71
CACNA1FO60840 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.48■□□□□ 0.71
CACNA1FO60840 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1FO60840 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CACNA1FO60840 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CACNA1FO60840 CICP11-201ENST00000434745 2827 ntBASIC19.48■□□□□ 0.71
CACNA1FO60840 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CACNA1FO60840 ACKR1-201ENST00000368121 1240 ntBASIC19.48■□□□□ 0.71
CACNA1FO60840 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.48■□□□□ 0.71
CACNA1FO60840 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.48■□□□□ 0.71
CACNA1FO60840 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1FO60840 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms