Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
HCN1O60741 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.86□□□□□ -0.03
HCN1O60741 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HCN1O60741 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.86□□□□□ -0.03
HCN1O60741 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HCN1O60741 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.85□□□□□ -0.03
HCN1O60741 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.85□□□□□ -0.03
HCN1O60741 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.85□□□□□ -0.03
HCN1O60741 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
HCN1O60741 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HCN1O60741 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HCN1O60741 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.85□□□□□ -0.03
HCN1O60741 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.85□□□□□ -0.03
HCN1O60741 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.85□□□□□ -0.03
HCN1O60741 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.85□□□□□ -0.03
HCN1O60741 INGX-202ENST00000489074 768 ntBASIC14.85□□□□□ -0.03
HCN1O60741 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.85□□□□□ -0.03
HCN1O60741 AC007967.4-201ENST00000614700 386 ntBASIC14.85□□□□□ -0.03
HCN1O60741 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.85□□□□□ -0.03
HCN1O60741 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
HCN1O60741 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HCN1O60741 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
HCN1O60741 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HCN1O60741 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HCN1O60741 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
HCN1O60741 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.84□□□□□ -0.03
HCN1O60741 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 TNRC18P2-201ENST00000417666 2714 ntBASIC14.84□□□□□ -0.03
HCN1O60741 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
HCN1O60741 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.84□□□□□ -0.03
HCN1O60741 TREML5P-201ENST00000421694 576 ntBASIC14.84□□□□□ -0.03
HCN1O60741 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.84□□□□□ -0.03
HCN1O60741 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 AL035456.1-201ENST00000456064 1369 ntBASIC14.84□□□□□ -0.03
HCN1O60741 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 FO538757.1-201ENST00000623083 1397 ntBASIC14.84□□□□□ -0.03
HCN1O60741 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
HCN1O60741 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.84□□□□□ -0.03
HCN1O60741 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
HCN1O60741 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HCN1O60741 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
HCN1O60741 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
HCN1O60741 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
HCN1O60741 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HCN1O60741 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
HCN1O60741 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
HCN1O60741 FOXO1B-201ENST00000504678 1527 ntBASIC14.83□□□□□ -0.04
HCN1O60741 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.83□□□□□ -0.04
HCN1O60741 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.83□□□□□ -0.04
HCN1O60741 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.83□□□□□ -0.04
HCN1O60741 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HCN1O60741 AL353705.2-201ENST00000428243 662 ntBASIC14.83□□□□□ -0.04
HCN1O60741 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.83□□□□□ -0.04
HCN1O60741 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms