Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.15□□□□□ -0.14
ZIC3O60481 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.15□□□□□ -0.14
ZIC3O60481 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ZIC3O60481 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 AC007950.2-201ENST00000615045 2347 ntBASIC14.15□□□□□ -0.14
ZIC3O60481 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.15□□□□□ -0.15
ZIC3O60481 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.15□□□□□ -0.15
ZIC3O60481 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.14□□□□□ -0.15
ZIC3O60481 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.14□□□□□ -0.15
ZIC3O60481 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.14□□□□□ -0.15
ZIC3O60481 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.14□□□□□ -0.15
ZIC3O60481 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.14□□□□□ -0.15
ZIC3O60481 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.14□□□□□ -0.15
ZIC3O60481 RN7SL692P-201ENST00000464677 288 ntBASIC14.14□□□□□ -0.15
ZIC3O60481 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.14□□□□□ -0.15
ZIC3O60481 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.14□□□□□ -0.15
ZIC3O60481 WASH4P-201ENST00000564273 1246 ntBASIC14.14□□□□□ -0.15
ZIC3O60481 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.14□□□□□ -0.15
ZIC3O60481 AL358472.5-202ENST00000641448 1267 ntBASIC14.14□□□□□ -0.15
ZIC3O60481 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
ZIC3O60481 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 AC105250.1-201ENST00000509378 2057 ntBASIC14.14□□□□□ -0.15
ZIC3O60481 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZIC3O60481 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZIC3O60481 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 AC008741.2-201ENST00000612792 3115 ntBASIC14.14□□□□□ -0.15
ZIC3O60481 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.14□□□□□ -0.15
ZIC3O60481 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.14□□□□□ -0.15
ZIC3O60481 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC3O60481 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 AC098614.1-201ENST00000368528 745 ntBASIC14.13□□□□□ -0.15
ZIC3O60481 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC3O60481 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZIC3O60481 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC3O60481 AC005225.4-201ENST00000557330 545 ntBASIC14.13□□□□□ -0.15
ZIC3O60481 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.13□□□□□ -0.15
ZIC3O60481 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.13□□□□□ -0.15
ZIC3O60481 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms