Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC007541.1-201ENST00000570282 1469 ntBASIC15.13■□□□□ 0.01
PRICKLE3O43900 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.13■□□□□ 0.01
PRICKLE3O43900 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PRICKLE3O43900 AC127383.1-201ENST00000444697 1800 ntBASIC15.13■□□□□ 0.01
PRICKLE3O43900 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 AC092127.1-201ENST00000567093 3455 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 AP003680.1-201ENST00000598970 3660 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 PRAL-201ENST00000624952 3286 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 AC055876.2-201ENST00000531834 546 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 RRP7BP-205ENST00000566851 833 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 AC015910.1-201ENST00000579400 975 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 SPDYE22P-201ENST00000582158 798 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 CHCHD2P3-201ENST00000603038 451 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 AC000095.1-201ENST00000603208 874 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 CLK3P2-201ENST00000427566 1453 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 AL121723.1-201ENST00000445194 1519 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRICKLE3O43900 AC068418.2-201ENST00000577309 3703 ntBASIC15.12■□□□□ 0.01
PRICKLE3O43900 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PRICKLE3O43900 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 AL391825.1-201ENST00000457671 1364 ntBASIC15.11■□□□□ 0.01
PRICKLE3O43900 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 GK-202ENST00000378941 458 ntTSL 3 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 AL133267.1-201ENST00000398220 340 ntBASIC15.11■□□□□ 0.01
PRICKLE3O43900 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.11■□□□□ 0.01
PRICKLE3O43900 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 AC009090.5-201ENST00000624886 2285 ntBASIC15.11■□□□□ 0.01
PRICKLE3O43900 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PRICKLE3O43900 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRICKLE3O43900 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE3O43900 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
PRICKLE3O43900 HYMAI-201ENST00000635591 3347 ntBASIC15.1■□□□□ 0.01
PRICKLE3O43900 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.1■□□□□ 0.01
PRICKLE3O43900 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE3O43900 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE3O43900 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRICKLE3O43900 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms