Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC10.87□□□□□ -0.67
NDUFA1O15239 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC10.87□□□□□ -0.67
NDUFA1O15239 CYGB-205ENST00000590175 830 ntTSL 3 BASIC10.87□□□□□ -0.67
NDUFA1O15239 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.87□□□□□ -0.67
NDUFA1O15239 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
NDUFA1O15239 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 BANP-203ENST00000393207 2438 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.87□□□□□ -0.67
NDUFA1O15239 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.87□□□□□ -0.67
NDUFA1O15239 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
NDUFA1O15239 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NDUFA1O15239 CYP51A1P2-201ENST00000419457 1499 ntBASIC10.87□□□□□ -0.67
NDUFA1O15239 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.86□□□□□ -0.67
NDUFA1O15239 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC10.86□□□□□ -0.67
NDUFA1O15239 SKP2-204ENST00000508514 821 ntTSL 3 BASIC10.86□□□□□ -0.67
NDUFA1O15239 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 TOLLIP-AS1-201ENST00000530897 939 ntBASIC10.86□□□□□ -0.67
NDUFA1O15239 RIN3-211ENST00000557762 517 ntTSL 3 BASIC10.86□□□□□ -0.67
NDUFA1O15239 BMF-207ENST00000559701 630 ntTSL 3 BASIC10.86□□□□□ -0.67
NDUFA1O15239 PAM16-208ENST00000573553 722 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 METTL23-204ENST00000586752 904 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC10.86□□□□□ -0.67
NDUFA1O15239 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 CELP-203ENST00000624767 2414 ntTSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.86□□□□□ -0.67
NDUFA1O15239 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.86□□□□□ -0.67
NDUFA1O15239 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NDUFA1O15239 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NDUFA1O15239 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms