Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 EEF1DP4-201ENST00000446006 880 ntBASIC16.45■□□□□ 0.22
CCDC188H7C350 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
CCDC188H7C350 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC188H7C350 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC188H7C350 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC188H7C350 WASH3P-207ENST00000560956 1394 ntBASIC16.45■□□□□ 0.22
CCDC188H7C350 FO538757.1-201ENST00000623083 1397 ntBASIC16.45■□□□□ 0.22
CCDC188H7C350 AL161772.1-201ENST00000610494 4412 ntBASIC16.45■□□□□ 0.22
CCDC188H7C350 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC188H7C350 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC188H7C350 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC188H7C350 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC188H7C350 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 KRT8P37-201ENST00000451609 1420 ntBASIC16.45■□□□□ 0.22
CCDC188H7C350 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC188H7C350 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC188H7C350 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC188H7C350 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC188H7C350 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC188H7C350 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 RPL5P21-201ENST00000404620 815 ntBASIC16.44■□□□□ 0.22
CCDC188H7C350 UNC93B7-201ENST00000509439 705 ntBASIC16.44■□□□□ 0.22
CCDC188H7C350 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC188H7C350 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC188H7C350 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.44■□□□□ 0.22
CCDC188H7C350 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 MIR7706-201ENST00000613747 67 ntBASIC16.44■□□□□ 0.22
CCDC188H7C350 AC012313.10-201ENST00000623509 926 ntBASIC16.44■□□□□ 0.22
CCDC188H7C350 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC188H7C350 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC188H7C350 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC188H7C350 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC188H7C350 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC188H7C350 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC188H7C350 AC025580.3-201ENST00000617932 1424 ntBASIC16.44■□□□□ 0.22
CCDC188H7C350 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC188H7C350 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC188H7C350 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC188H7C350 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC188H7C350 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC188H7C350 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC188H7C350 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CCDC188H7C350 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC188H7C350 AL136982.4-201ENST00000437689 1740 ntBASIC16.43■□□□□ 0.22
CCDC188H7C350 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC188H7C350 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC188H7C350 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC188H7C350 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC188H7C350 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC188H7C350 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC188H7C350 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC188H7C350 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC188H7C350 EMBP1-201ENST00000458200 901 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms