Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC008550.1-201ENST00000511500 884 ntBASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC013467.2-201ENST00000605472 835 ntBASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TMEM191A-211ENST00000637163 1067 ntBASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PCGF3-213ENST00000620529 1899 ntBASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CRYGFP-201ENST00000418459 633 ntBASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC104390.1-201ENST00000555663 520 ntBASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MIR4785-201ENST00000585005 73 ntBASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AP006294.2-201ENST00000641667 209 ntBASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms