Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 PCDH8P1-201ENST00000428983 2773 ntBASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 C1QBPP1-201ENST00000400117 770 ntBASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 CROCCP4-201ENST00000457096 498 ntBASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 AC233724.13-201ENST00000598383 410 ntBASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 AC018665.1-201ENST00000622927 1362 ntBASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TBC1D3FA6NER0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 VDAC1P7-201ENST00000462417 847 ntBASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 KRT18P43-201ENST00000469825 1281 ntBASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 AC133552.6-201ENST00000613406 534 ntBASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 MIR6775-201ENST00000617557 69 ntBASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 AL121723.1-201ENST00000445194 1519 ntBASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TBC1D3FA6NER0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TBC1D3FA6NER0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms