Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC025678.2-201ENST00000562061 970 ntBASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 AL136317.3-201ENST00000618497 906 ntBASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 TUBB3P1-201ENST00000405796 1332 ntBASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 AC013268.4-201ENST00000637413 2228 ntBASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC162PA2VCL2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 AC126177.1-201ENST00000547829 2218 ntBASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 SPDYE12P-201ENST00000618416 771 ntBASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 AC022532.1-201ENST00000624563 1728 ntBASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 AC127383.1-201ENST00000444697 1800 ntBASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC162PA2VCL2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 AC125807.1-201ENST00000483097 614 ntBASIC15.81■□□□□ 0.12
CCDC162PA2VCL2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms