Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144AA2RUR9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CCDC144AA2RUR9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144AA2RUR9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC144AA2RUR9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AL133338.1-201ENST00000565695 1517 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 MIR1908-201ENST00000410394 80 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AC084346.2-201ENST00000607097 949 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AC145423.3-201ENST00000615987 467 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AMT-224ENST00000635808 1610 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 OLR1-203ENST00000432556 950 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 FAM197Y7-201ENST00000432892 766 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 YBX1P6-201ENST00000442962 1002 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AL590640.2-201ENST00000457038 527 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AC009542.2-202ENST00000619004 1067 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AC138951.2-201ENST00000623455 1161 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 AC008687.7-202ENST00000637404 953 ntBASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC144AA2RUR9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCDC144AA2RUR9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CCDC144AA2RUR9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CCDC144AA2RUR9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
CCDC144AA2RUR9 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.18
CCDC144AA2RUR9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.18
CCDC144AA2RUR9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 AL513523.2-202ENST00000427283 2040 ntBASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 APOC3-202ENST00000375345 604 ntTSL 5 BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 DUX4L45-201ENST00000566406 1057 ntBASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 AL645728.2-202ENST00000641679 227 ntBASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC144AA2RUR9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 AC148477.4-201ENST00000613430 1793 ntBASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 AC078819.1-201ENST00000547454 765 ntBASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 AC012085.1-201ENST00000548270 765 ntBASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC144AA2RUR9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms