Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC092474.2-201ENST00000424288 719 ntBASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC007967.2-201ENST00000432613 625 ntBASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 KRT19P2-202ENST00000557173 1012 ntBASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC034105.1-201ENST00000563488 319 ntBASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC145285.3-201ENST00000564603 959 ntBASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF103-CHMP3A0A140T963 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF103-CHMP3A0A140T963 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 AC139749.1-202ENST00000617529 3139 ntBASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF103-CHMP3A0A140T963 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms