Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 RPS2P28-201ENST00000314255 741 ntBASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV5A0A0B4J249 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TRAV5A0A0B4J249 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRAV5A0A0B4J249 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRAV5A0A0B4J249 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRAV5A0A0B4J249 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRAV5A0A0B4J249 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 CRYGEP-201ENST00000412192 528 ntBASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 PRYP6-201ENST00000514804 343 ntBASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 FAM215A-202ENST00000632077 792 ntBASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 AC013726.1-201ENST00000563747 2285 ntBASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV5A0A0B4J249 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms