Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 MSTO2P-201ENST00000314835 1709 ntBASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HS3ST3A1Q9Y663 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 AC099336.1-201ENST00000417053 1171 ntBASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 C2orf27AP3-201ENST00000434123 579 ntBASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 KRT18P25-201ENST00000508931 1278 ntBASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 AL354718.3-201ENST00000616414 581 ntBASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 BX539320.1-201ENST00000623759 877 ntBASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 CR382287.1-201ENST00000623954 586 ntBASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HS3ST3A1Q9Y663 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 NUS1P3-201ENST00000423502 862 ntBASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 AC092658.1-201ENST00000505836 891 ntBASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 AC106760.1-201ENST00000508690 800 ntBASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 AC025181.2-201ENST00000606994 802 ntBASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
HS3ST3A1Q9Y663 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms