Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 AL022328.3-201ENST00000607943 679 ntBASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC23.01■■□□□ 1.27
SHANK2Q9UPX8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 SCARNA20.5-201ENST00000516991 142 ntBASIC23■■□□□ 1.27
SHANK2Q9UPX8 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHANK2Q9UPX8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC23■■□□□ 1.27
SHANK2Q9UPX8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 ARTN-209ENST00000479128 471 ntTSL 3 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC22.99■■□□□ 1.27
SHANK2Q9UPX8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 PPY2P-201ENST00000582808 702 ntBASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 ZACNP1-201ENST00000612259 710 ntBASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 SUPT20HL2-201ENST00000486479 2409 ntBASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 AL662844.4-201ENST00000606367 2838 ntBASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 AC009090.5-201ENST00000624886 2285 ntBASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 MBP-227ENST00000526111 581 ntTSL 4 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SHANK2Q9UPX8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SHANK2Q9UPX8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms