Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 ANKRD19P-201ENST00000338192 862 ntBASIC16.12■□□□□ 0.17
EBF1Q9UH73 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 AL442647.2-201ENST00000429864 857 ntBASIC16.12■□□□□ 0.17
EBF1Q9UH73 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 FAM8A2P-201ENST00000528813 1142 ntBASIC16.12■□□□□ 0.17
EBF1Q9UH73 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 AL391069.4-201ENST00000609583 481 ntBASIC16.12■□□□□ 0.17
EBF1Q9UH73 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 RPSAP52-203ENST00000622976 1023 ntBASIC16.12■□□□□ 0.17
EBF1Q9UH73 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
EBF1Q9UH73 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
EBF1Q9UH73 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 AL162726.2-201ENST00000438986 1017 ntBASIC16.11■□□□□ 0.17
EBF1Q9UH73 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 BNIP3P42-201ENST00000454982 569 ntBASIC16.11■□□□□ 0.17
EBF1Q9UH73 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 AC104640.1-201ENST00000562617 2109 ntBASIC16.11■□□□□ 0.17
EBF1Q9UH73 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 BNIP3P29-201ENST00000598302 571 ntBASIC16.11■□□□□ 0.17
EBF1Q9UH73 AC011447.5-201ENST00000616168 564 ntBASIC16.11■□□□□ 0.17
EBF1Q9UH73 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
EBF1Q9UH73 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
EBF1Q9UH73 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
EBF1Q9UH73 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.1■□□□□ 0.17
EBF1Q9UH73 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms