Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.32■□□□□ 0.04
CPNE7Q9UBL6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 FAM86LP-201ENST00000478302 853 ntBASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 AC132938.2-201ENST00000579188 680 ntBASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 WFDC1-204ENST00000613603 549 ntBASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 IGHV3-72-202ENST00000621503 303 ntBASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 AL591163.1-201ENST00000641757 987 ntBASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CPNE7Q9UBL6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 GIMAP3P-201ENST00000495150 836 ntBASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE7Q9UBL6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms