Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.63■□□□□ 0.09
NCDNQ9UBB6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.63■□□□□ 0.09
NCDNQ9UBB6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 AC060834.1-201ENST00000443027 2032 ntBASIC15.62■□□□□ 0.09
NCDNQ9UBB6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 AZGP1P1-201ENST00000411909 902 ntBASIC15.62■□□□□ 0.09
NCDNQ9UBB6 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 RPSAP36-202ENST00000494591 1261 ntBASIC15.62■□□□□ 0.09
NCDNQ9UBB6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 AC092978.1-202ENST00000637590 1327 ntBASIC15.62■□□□□ 0.09
NCDNQ9UBB6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
NCDNQ9UBB6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 MIR1202-201ENST00000408529 83 ntBASIC15.61■□□□□ 0.09
NCDNQ9UBB6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AC008267.1-201ENST00000474858 1069 ntBASIC15.61■□□□□ 0.09
NCDNQ9UBB6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 MIR4750-201ENST00000584564 56 ntBASIC15.61■□□□□ 0.09
NCDNQ9UBB6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AL451050.2-201ENST00000606967 682 ntBASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AC097724.1-201ENST00000609581 426 ntBASIC15.61■□□□□ 0.09
NCDNQ9UBB6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AL096828.3-201ENST00000615354 462 ntBASIC15.61■□□□□ 0.09
NCDNQ9UBB6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 AGGF1P2-201ENST00000426656 2106 ntBASIC15.61■□□□□ 0.09
NCDNQ9UBB6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.61■□□□□ 0.09
NCDNQ9UBB6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
NCDNQ9UBB6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCDNQ9UBB6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCDNQ9UBB6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCDNQ9UBB6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCDNQ9UBB6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms