Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SALL1Q9NSC2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 KRT223P-202ENST00000449164 1292 ntBASIC18.88■□□□□ 0.61
SALL1Q9NSC2 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SALL1Q9NSC2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 ACKR1-201ENST00000368121 1240 ntBASIC18.87■□□□□ 0.61
SALL1Q9NSC2 BAATP1-201ENST00000412284 1225 ntBASIC18.87■□□□□ 0.61
SALL1Q9NSC2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 AC104989.1-201ENST00000519711 778 ntBASIC18.87■□□□□ 0.61
SALL1Q9NSC2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.87■□□□□ 0.61
SALL1Q9NSC2 PDIA3P1-201ENST00000471856 1510 ntBASIC18.87■□□□□ 0.61
SALL1Q9NSC2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 AC092933.1-201ENST00000393644 945 ntBASIC18.86■□□□□ 0.61
SALL1Q9NSC2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 AC093433.1-201ENST00000458048 571 ntBASIC18.86■□□□□ 0.61
SALL1Q9NSC2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 AC022137.2-201ENST00000503482 481 ntBASIC18.86■□□□□ 0.61
SALL1Q9NSC2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 AC133552.6-201ENST00000613406 534 ntBASIC18.86■□□□□ 0.61
SALL1Q9NSC2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms