Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.36■□□□□ 0.21
HPS4Q9NQG7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 COX11-210ENST00000639671 696 ntBASIC16.36■□□□□ 0.21
HPS4Q9NQG7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 AC007326.2-201ENST00000624224 7579 ntBASIC16.36■□□□□ 0.21
HPS4Q9NQG7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 AL442647.2-201ENST00000429864 857 ntBASIC16.35■□□□□ 0.21
HPS4Q9NQG7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 BTNL10-201ENST00000595971 695 ntBASIC16.35■□□□□ 0.21
HPS4Q9NQG7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HPS4Q9NQG7 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.35■□□□□ 0.21
HPS4Q9NQG7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.34■□□□□ 0.21
HPS4Q9NQG7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 KRT18P64-201ENST00000434946 1219 ntBASIC16.34■□□□□ 0.21
HPS4Q9NQG7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 KRT223P-202ENST00000449164 1292 ntBASIC16.34■□□□□ 0.21
HPS4Q9NQG7 AC022494.1-201ENST00000466044 728 ntBASIC16.34■□□□□ 0.21
HPS4Q9NQG7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.34■□□□□ 0.21
HPS4Q9NQG7 AP005482.1-201ENST00000563722 1273 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms