Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AC015936.2-201ENST00000593177 259 ntBASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 MIR6805-201ENST00000615055 62 ntBASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AL162274.1-201ENST00000617191 1098 ntBASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AC132872.4-202ENST00000622924 2756 ntBASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 AC005252.2-201ENST00000624630 1141 ntBASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
KIAA1549Q9HCM3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 DRD5P1-201ENST00000456605 1438 ntBASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 AC011495.1-201ENST00000498085 584 ntBASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 AC133539.2-201ENST00000604757 467 ntBASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.93□□□□□ -0.18
KIAA1549Q9HCM3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 SOCS2P1-201ENST00000417727 557 ntBASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AC134915.1-201ENST00000426461 574 ntBASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 KRT223P-202ENST00000449164 1292 ntBASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AC068587.3-201ENST00000526613 355 ntBASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AC013268.4-201ENST00000637413 2228 ntBASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 AC046158.3-201ENST00000624947 2558 ntBASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
KIAA1549Q9HCM3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms