Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.32■□□□□ 0.04
LIN28AQ9H9Z2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.32■□□□□ 0.04
LIN28AQ9H9Z2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIN28AQ9H9Z2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.32■□□□□ 0.04
LIN28AQ9H9Z2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LIN28AQ9H9Z2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.32■□□□□ 0.04
LIN28AQ9H9Z2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIN28AQ9H9Z2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LIN28AQ9H9Z2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 GGT4P-201ENST00000623672 1708 ntBASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 KRT18P32-201ENST00000424695 1287 ntBASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 AL139011.1-202ENST00000642063 584 ntBASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
LIN28AQ9H9Z2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 SLC25A39P2-201ENST00000537614 270 ntBASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.3■□□□□ 0.04
LIN28AQ9H9Z2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms