Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
POLR2J3Q9H1A7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 TCAF2P1-201ENST00000291129 2421 ntBASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 AL355306.1-201ENST00000415580 579 ntBASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 AC027307.2-201ENST00000591252 911 ntBASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 AC027601.4-201ENST00000611259 610 ntBASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.67□□□□□ -0.06
POLR2J3Q9H1A7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 FOXO1B-201ENST00000504678 1527 ntBASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 TFAMP1-201ENST00000412727 736 ntBASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AC142381.1-201ENST00000426099 345 ntBASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AL135744.1-201ENST00000565098 629 ntBASIC14.66□□□□□ -0.06
POLR2J3Q9H1A7 AL138918.1-201ENST00000568306 659 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms