Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 RPL5P21-201ENST00000404620 815 ntBASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 TOMM22P5-201ENST00000416399 439 ntBASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 LINC01115-203ENST00000606068 577 ntBASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 LINC00554-201ENST00000564841 3011 ntBASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CCSER1Q9C0I3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AC084364.1-201ENST00000551967 1556 ntBASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 MIR943-201ENST00000401286 94 ntBASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AC015922.1-201ENST00000421102 1152 ntBASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 DUX4L27-201ENST00000554796 1261 ntBASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AL109936.8-201ENST00000641772 604 ntBASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 AC144831.1-201ENST00000573312 2656 ntBASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCSER1Q9C0I3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 AC011270.2-201ENST00000624293 2550 ntBASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 AC241585.1-201ENST00000433527 519 ntBASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 AC044860.1-202ENST00000559481 777 ntBASIC17.62■□□□□ 0.41
CCSER1Q9C0I3 AC015910.1-201ENST00000579400 975 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms