Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
UBE2OQ9C0C9 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 AL136982.4-201ENST00000437689 1740 ntBASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 RPL13P2-201ENST00000440687 659 ntBASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
UBE2OQ9C0C9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 AC245884.6-201ENST00000515672 1067 ntBASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 GNRHR2-203ENST00000581100 1187 ntBASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 NDUFV2P1-201ENST00000596415 907 ntBASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 AC005252.2-201ENST00000624630 1141 ntBASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2OQ9C0C9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2OQ9C0C9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms