Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.9■□□□□ 0.62
UPF3BQ9BZI7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UPF3BQ9BZI7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
UPF3BQ9BZI7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.89■□□□□ 0.62
UPF3BQ9BZI7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
UPF3BQ9BZI7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 AL627223.1-201ENST00000416693 442 ntBASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 KRT18P32-201ENST00000424695 1287 ntBASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 EEF1DP4-201ENST00000446006 880 ntBASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF3BQ9BZI7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 GPS2P2-201ENST00000430745 888 ntBASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 ALG1L8P-201ENST00000533887 760 ntBASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 HNRNPUP1-201ENST00000554987 333 ntBASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF3BQ9BZI7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
UPF3BQ9BZI7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms