Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC105250.1-201ENST00000509378 2057 ntBASIC13.12□□□□□ -0.31
GAFA1Q96PS6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 AC020658.6-201ENST00000623564 1870 ntBASIC13.12□□□□□ -0.31
GAFA1Q96PS6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 AC011467.4-201ENST00000594891 528 ntBASIC13.12□□□□□ -0.31
GAFA1Q96PS6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
GAFA1Q96PS6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AC009090.5-201ENST00000624886 2285 ntBASIC13.11□□□□□ -0.31
GAFA1Q96PS6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 BCRP1-201ENST00000444246 691 ntBASIC13.11□□□□□ -0.31
GAFA1Q96PS6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 TIMM17BP1-201ENST00000545713 516 ntBASIC13.11□□□□□ -0.31
GAFA1Q96PS6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 SPCS2P1-201ENST00000561636 679 ntBASIC13.11□□□□□ -0.31
GAFA1Q96PS6 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AC104794.3-201ENST00000566840 1248 ntBASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AC092337.1-201ENST00000568699 1129 ntBASIC13.11□□□□□ -0.31
GAFA1Q96PS6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 AJ011932.1-201ENST00000621707 465 ntBASIC13.11□□□□□ -0.31
GAFA1Q96PS6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GAFA1Q96PS6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms