Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 LINC00265-3P-201ENST00000447588 903 ntBASIC12.05□□□□□ -0.48
AP1S3Q96PC3 AC104076.2-201ENST00000448912 469 ntBASIC12.05□□□□□ -0.48
AP1S3Q96PC3 TSSC2-201ENST00000450217 709 ntBASIC12.05□□□□□ -0.48
AP1S3Q96PC3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 DUX4L26-201ENST00000489078 1255 ntBASIC12.05□□□□□ -0.48
AP1S3Q96PC3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.05□□□□□ -0.48
AP1S3Q96PC3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 SNX33P1-201ENST00000592116 1762 ntBASIC12.05□□□□□ -0.48
AP1S3Q96PC3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
AP1S3Q96PC3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 MIR648-201ENST00000385046 94 ntBASIC12.04□□□□□ -0.48
AP1S3Q96PC3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 AC104819.1-201ENST00000504587 486 ntBASIC12.04□□□□□ -0.48
AP1S3Q96PC3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 AC074051.2-201ENST00000565115 352 ntBASIC12.04□□□□□ -0.48
AP1S3Q96PC3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 AC023157.3-201ENST00000619086 2088 ntBASIC12.04□□□□□ -0.48
AP1S3Q96PC3 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 REXO1L8P-201ENST00000604378 1897 ntBASIC12.04□□□□□ -0.48
AP1S3Q96PC3 AC016734.2-201ENST00000624325 1377 ntBASIC12.04□□□□□ -0.48
AP1S3Q96PC3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP1S3Q96PC3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP1S3Q96PC3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms