Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 AC008894.3-201ENST00000624324 3103 ntBASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 AC092552.1-201ENST00000547243 906 ntBASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 AL596325.1-201ENST00000563991 1082 ntBASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 CTBP2P3-201ENST00000585629 1255 ntBASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 AP003680.1-201ENST00000598970 3660 ntBASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 AC105250.1-201ENST00000509378 2057 ntBASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ECHDC3Q96DC8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 AL442647.2-201ENST00000429864 857 ntBASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 AC104596.2-201ENST00000512793 793 ntBASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 AL358472.5-202ENST00000641448 1267 ntBASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ECHDC3Q96DC8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ECHDC3Q96DC8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
ECHDC3Q96DC8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ECHDC3Q96DC8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ECHDC3Q96DC8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
ECHDC3Q96DC8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
ECHDC3Q96DC8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ECHDC3Q96DC8 PRAL-201ENST00000624952 3286 ntBASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 AC098614.1-201ENST00000368528 745 ntBASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 RN7SL692P-201ENST00000464677 288 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms