Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CPNE4Q96A23 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CPNE4Q96A23 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CPNE4Q96A23 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CPNE4Q96A23 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE4Q96A23 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.24□□□□□ -0.13
CPNE4Q96A23 AC024909.3-201ENST00000611513 2257 ntBASIC14.24□□□□□ -0.13
CPNE4Q96A23 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 FAM8A3P-201ENST00000427218 844 ntBASIC14.23□□□□□ -0.13
CPNE4Q96A23 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 AC044860.1-202ENST00000559481 777 ntBASIC14.23□□□□□ -0.13
CPNE4Q96A23 AC009407.1-201ENST00000568958 598 ntBASIC14.23□□□□□ -0.13
CPNE4Q96A23 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE4Q96A23 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE4Q96A23 Z97205.2-201ENST00000564697 1639 ntBASIC14.23□□□□□ -0.13
CPNE4Q96A23 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 AC026691.1-201ENST00000602502 2017 ntBASIC14.22□□□□□ -0.13
CPNE4Q96A23 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 MRPS18AP1-201ENST00000414458 589 ntBASIC14.22□□□□□ -0.13
CPNE4Q96A23 AC114501.2-201ENST00000439631 535 ntBASIC14.22□□□□□ -0.13
CPNE4Q96A23 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 TSPY16P-201ENST00000449843 468 ntBASIC14.22□□□□□ -0.13
CPNE4Q96A23 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 AC135586.1-201ENST00000539323 574 ntBASIC14.22□□□□□ -0.13
CPNE4Q96A23 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 MIR4745-201ENST00000577608 62 ntBASIC14.22□□□□□ -0.13
CPNE4Q96A23 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CPNE4Q96A23 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 AL109936.8-201ENST00000641772 604 ntBASIC14.22□□□□□ -0.13
CPNE4Q96A23 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE4Q96A23 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms