Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 GGT3P-204ENST00000453783 1664 ntBASIC14.98□□□□□ -0.01
TM9SF4Q92544 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.98□□□□□ -0.01
TM9SF4Q92544 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TM9SF4Q92544 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.98□□□□□ -0.01
TM9SF4Q92544 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 AC093724.1-201ENST00000448659 1027 ntBASIC14.97□□□□□ -0.01
TM9SF4Q92544 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 DOC2GP-202ENST00000514950 1163 ntBASIC14.97□□□□□ -0.01
TM9SF4Q92544 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 BANF1P1-201ENST00000553684 263 ntBASIC14.97□□□□□ -0.01
TM9SF4Q92544 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 GGT4P-201ENST00000623672 1708 ntBASIC14.97□□□□□ -0.01
TM9SF4Q92544 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.97□□□□□ -0.01
TM9SF4Q92544 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TM9SF4Q92544 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 AC073347.1-201ENST00000421633 2643 ntBASIC14.96□□□□□ -0.01
TM9SF4Q92544 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TM9SF4Q92544 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TM9SF4Q92544 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms