Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 RCN1P1-201ENST00000400413 996 ntBASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 GPX1P2-201ENST00000429271 606 ntBASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 AC132008.2-207ENST00000454517 770 ntBASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 MIR4515-201ENST00000584082 81 ntBASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 INTS4P1-203ENST00000641008 3683 ntBASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 AL589702.1-201ENST00000641229 1509 ntBASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 AC104076.2-201ENST00000448912 469 ntBASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 AC012615.1-201ENST00000565797 1299 ntBASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
SMIM4Q8WVI0 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms