Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HIPK4Q8NE63 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.46■□□□□ 0.06
HIPK4Q8NE63 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HIPK4Q8NE63 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HIPK4Q8NE63 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.46■□□□□ 0.06
HIPK4Q8NE63 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.46■□□□□ 0.06
HIPK4Q8NE63 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
HIPK4Q8NE63 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 AC112693.3-201ENST00000624819 1983 ntBASIC15.45■□□□□ 0.06
HIPK4Q8NE63 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 AGAP7P-201ENST00000582299 2062 ntBASIC15.45■□□□□ 0.06
HIPK4Q8NE63 AGAP14-201ENST00000624701 2060 ntBASIC15.45■□□□□ 0.06
HIPK4Q8NE63 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.45■□□□□ 0.06
HIPK4Q8NE63 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
HIPK4Q8NE63 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.44■□□□□ 0.06
HIPK4Q8NE63 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 AC136632.2-201ENST00000512891 861 ntBASIC15.44■□□□□ 0.06
HIPK4Q8NE63 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HIPK4Q8NE63 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms