Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 AC092580.3-201ENST00000430932 139 ntBASIC13.86□□□□□ -0.19
CPEB3Q8NE35 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 AC097493.3-201ENST00000509725 367 ntBASIC13.86□□□□□ -0.19
CPEB3Q8NE35 AC027369.6-201ENST00000525520 931 ntBASIC13.86□□□□□ -0.19
CPEB3Q8NE35 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 TEX28P1-201ENST00000613479 1221 ntBASIC13.86□□□□□ -0.19
CPEB3Q8NE35 TEX28P2-201ENST00000617764 1221 ntBASIC13.86□□□□□ -0.19
CPEB3Q8NE35 AC093512.1-201ENST00000617969 520 ntBASIC13.86□□□□□ -0.19
CPEB3Q8NE35 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPEB3Q8NE35 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPEB3Q8NE35 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CPEB3Q8NE35 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms