Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX5Q8N196 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.2■□□□□ 0.18
SIX5Q8N196 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.2■□□□□ 0.18
SIX5Q8N196 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.2■□□□□ 0.18
SIX5Q8N196 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX5Q8N196 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX5Q8N196 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.2■□□□□ 0.18
SIX5Q8N196 AC244452.3-201ENST00000636814 210 ntBASIC16.2■□□□□ 0.18
SIX5Q8N196 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX5Q8N196 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SIX5Q8N196 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SIX5Q8N196 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX5Q8N196 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.2■□□□□ 0.18
SIX5Q8N196 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 KRT8P37-201ENST00000451609 1420 ntBASIC16.19■□□□□ 0.18
SIX5Q8N196 AL691432.1-201ENST00000596308 1422 ntBASIC16.19■□□□□ 0.18
SIX5Q8N196 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.19■□□□□ 0.18
SIX5Q8N196 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.19■□□□□ 0.18
SIX5Q8N196 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SIX5Q8N196 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SIX5Q8N196 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SIX5Q8N196 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.19■□□□□ 0.18
SIX5Q8N196 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
SIX5Q8N196 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.19■□□□□ 0.18
SIX5Q8N196 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.19■□□□□ 0.18
SIX5Q8N196 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.19■□□□□ 0.18
SIX5Q8N196 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 ACTG1P17-201ENST00000558391 1119 ntBASIC16.19■□□□□ 0.18
SIX5Q8N196 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 MIR6727-201ENST00000620702 65 ntBASIC16.19■□□□□ 0.18
SIX5Q8N196 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SIX5Q8N196 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SIX5Q8N196 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SIX5Q8N196 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SIX5Q8N196 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.19■□□□□ 0.18
SIX5Q8N196 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.19■□□□□ 0.18
SIX5Q8N196 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX5Q8N196 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.18■□□□□ 0.18
SIX5Q8N196 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.18■□□□□ 0.18
SIX5Q8N196 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SIX5Q8N196 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.18■□□□□ 0.18
SIX5Q8N196 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.18■□□□□ 0.18
SIX5Q8N196 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.18■□□□□ 0.18
SIX5Q8N196 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.18■□□□□ 0.18
SIX5Q8N196 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.18■□□□□ 0.18
SIX5Q8N196 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.18■□□□□ 0.18
SIX5Q8N196 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SIX5Q8N196 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.18■□□□□ 0.18
SIX5Q8N196 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.18■□□□□ 0.18
SIX5Q8N196 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX5Q8N196 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms